- MSc, Simon Fraser University, 2011
- BHSc, University of Calgary, 2009
Email: bshabash@sfu.ca
My name is Boris and I am currently doing my PhD at Simon Fraser University. Academically, my interests lie in Evolutionary Computation techniques for solving bio-informatics based problems, as well as bio-informatics related visualization. I have worked on projects that ranged from work in the wet lab doing synthetic biology to coding of simulations of biochemical processes inside cells.
I completed my first degree as a Bachelor of Health Sciences (BHSc), specializing in bio-informatics, at the University of Calgary, under the guidance of Dr. Christian Jacob. My focus for my honours thesis was evolving virtual biological "circuits", that could later be synthesized and put into cells, using Evolutoinary Computation techniques.
My second degree was awarded by Simon
Fraser University as a Master of Science (MSc), specializing in Computing
Science. My MSc thesis focus was improving the performance
and portability
of jViz.RNA,
a software designed for RNA secondary structure visualization.
My supervisor at the moment is Dr. Kay Wiese, who was my supervisor for my MSc thesis as well.
Publications:
-
Boris Shabash and Kay Wiese,
pEvoSAT: a Novel Permutation Based Genetic Algorithm for Solving the Boolean Satisfiability Problem
.
in Proceeding of the Fifteenth Annual Conference on Genetic and Evolutionary Computation Conference (GECCO 2013), 861-868, 2013
-
Boris Shabash, Kay Wiese, and Edward Glen,
Improving the Portability and Performance of jViz.RNA - A Dynamic RNA Visualization Software
.
Pattern Recognition in Bioinformatics, (7632):82-93, 2012
-
Boris Shabash, Zhi Feng Huang, and Ghassan Hamarneh,
Medical Image Analysis with ITK on Apple iOS
.
Kitware Source - Software Developers Quarterly, (16):3-5, 2011
-
Boris Shabash, Ghassan Hamarneh, Zhi Feng Huang, and Luis Ibanez.
ITK Image IO Interface with Apple iOS
.
.
Insight Journal,
July-December:1-16, 2010
- Boris Shabash, Ghassan Hamarneh, Zhi Feng Huang, and Luis Ibanez. ITK on the iOS . Insight Journal, July-December:1-9, 2010